Difference between revisions of "Hannah"
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:* "whereas in RNA, minor tautomeric forms have been proposed to enhance the structural and functional diversity of RNA enzymes and aptamers" (https://rnajournal.cshlp.org/content/21/1/1.full.html) | :* "whereas in RNA, minor tautomeric forms have been proposed to enhance the structural and functional diversity of RNA enzymes and aptamers" (https://rnajournal.cshlp.org/content/21/1/1.full.html) | ||
− | + | {| | |
− | [[File:F1.large.jpg| | + | |[[File:F1.large.jpg|thumbnail|Figure 2: Tautomers of nucleic acid bases]] |
+ | |} | ||
==WebMO== | ==WebMO== | ||
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==Keto Acetylacetone== | ==Keto Acetylacetone== | ||
− | [[File:molecule (2).png| | + | {| |
+ | |[[File:molecule (2).png|thumbnail|Figure 3: 3D structure of keto-acetylacetone]] | ||
+ | |} | ||
Proton NMR | Proton NMR | ||
− | [[File:nmrKetoZoomed.png| | + | {| |
+ | |[[File:nmrKetoZoomed.png|thumbnail|Figure 4: Proton NMR for keto-acetylacetone]] | ||
+ | |} | ||
Proton NMR shifts:[[:File:NMR-Chemical-Shift-PPM-Range-and-Values-Table-.png]] | Proton NMR shifts:[[:File:NMR-Chemical-Shift-PPM-Range-and-Values-Table-.png]] | ||
==Enol Acetylacetone== | ==Enol Acetylacetone== | ||
− | [[File:molecule.png| | + | {| |
+ | |[[File:molecule.png|thumbnail| Figure 5: 3D structure of enol-acetylacetone]] | ||
+ | |} | ||
Proton NMR | Proton NMR | ||
− | [[File:nmrEnol2.png| | + | {| |
+ | |[[File:nmrEnol2.png|thumbnail| Figure 6: Proton NMR of enol-acetylacetone]] | ||
+ | |} | ||
Proton NMR shifts:[[:File:NMR-Chemical-Shift-PPM-Range-and-Values-Table-.png]] | Proton NMR shifts:[[:File:NMR-Chemical-Shift-PPM-Range-and-Values-Table-.png]] | ||
N.B. Hydrogen bonding deshields the proton, further increasing the chemical shift | N.B. Hydrogen bonding deshields the proton, further increasing the chemical shift |
Revision as of 21:39, 15 April 2021
Introduction
Tautomers of Acetylacetone (C5H8O2)
- Keto = ketone
- Enol = alcohol
- -may also be referred to as an alkenol
- Usually the keto tautomer is favored
Why Tautomerization Matters
- Different solvents may change the equilibrium of the keto- and enol- forms
- -Keto/enol equilibrium can be determined using proton NMR, as the spectra are different enough to distinguish between the tautomers
- Tautomers in DNA replication have been hypothesized to contribute to mutagenic mispairings
- "whereas in RNA, minor tautomeric forms have been proposed to enhance the structural and functional diversity of RNA enzymes and aptamers" (https://rnajournal.cshlp.org/content/21/1/1.full.html)
WebMO
- All calculations were done using HF/6-31G(d) for geometry optimization
- The products of the geometry optimizations were used to calculate the NMR spectra using the same basis sets
Keto Acetylacetone
Proton NMR
Proton NMR shifts:File:NMR-Chemical-Shift-PPM-Range-and-Values-Table-.png
Enol Acetylacetone
Proton NMR
Proton NMR shifts:File:NMR-Chemical-Shift-PPM-Range-and-Values-Table-.png
N.B. Hydrogen bonding deshields the proton, further increasing the chemical shift