Difference between revisions of "Gepasi"

Revision as of 16:06, 17 June 2019

1) Rename title.

2) Add reactions.

3) Make sure the number of metabolites matches the reactions.

4) Click "kinetics."

5) Choose "mass action (reversible)."

6) Enter k1 and k2 values for each reaction.

7) Choose "metabolite."

8) Enter concentrations for each metabolite.

9) Click "time course" choose run.

To Save Data

1) Click the task tab.

2) Choose "edit."

3) Add metabolites and time.

4) Rename the file time course.

5) Click "run."

Figure 1. Graph of the HRP phases over a time span of 0.02 seconds.

Figure 2. Graph of the HRP phases with the HRP2 rate increased to 1e^5.

Figure 3. Graph of the HRP phases with the HRP2 rate increased to 1e^6.

@@ Line 30: / Line 30: @@
 ) Click "run."
-==Example Graph==
+==Example Graphs==
+[[File:hrp_01_0.02_graph.jpg|400px|thumb|left|Figure 1. Graph of the HRP phases over a time span of 0.02 seconds.]]
+[[File:hrp_1e5_graph.jpg|400px|thumb|left|Figure 2. Graph of the HRP phases with the HRP2 rate increased to 1e^5.]]
+[[File:hrp_1e6_graph.jpg|400px|thumb|left|Figure 3. Graph of the HRP phases with the HRP2 rate increased to 1e^6.]]